- S2001-2002 #19: Integrative Biology (UC Berkeley)/Timothy D. White (April 10, 2002–June 2, 2023)2,401 objects
- S1977-1978 #63: Anthropology (UC Berkeley)/Robert Fleming Heizer (1978–October 14, 1980)1,619 objects
- S2023-2024 #1: Anthropology (UC Berkeley)/Lisa Maher (February 7, 2025–unknown)932 objects
- S1971-1972 #120: Anthropology (UC Berkeley)/Robert Fleming Heizer (April 3, 1972–October 14, 1980)611 objects
- S2002-2003 #14: Pacific Legacy, Inc./Thomas L. Jackson (February 21, 2003–February 21, 2004)597 objects
- S1960-1961 #1 [formerly I-60-B]: Nevada State Museum/Richard Shutler Jr. (October 31, 1960–August 15, 1963)562 objects
- S1990-1991 #3: University of California, Riverside (August 14, 1990–November 20, 1992)413 objects
- S1996-1997 #10: Anthropology (UC Berkeley)/John Desmond Clark (March 14, 1997–April 9, 2007)259 objects
- S2001-2002 #15: Anthropology (UC Berkeley)/Kent Lightfoot (January 23, 2002–January 23, 2003)255 objects
- S2005-2006 #2: Integrative Biology (UC Berkeley)/Timothy D. White (April 10, 2002–unknown)255 objects
- S1971-1972 #17: University of California, Riverside/James F. O'Connell (August 20, 1971–1972)243 objects
- S2004-2005 #8: Anthropology (UC Berkeley)/Kent Lightfoot (dates unknown)228 objects
- S1979-1980 #66: Department of Anthropology (CSU Sacramento) (May 13, 1980–July 14, 1980)185 objects
- S1965-1966 #17: Anthropology (UC Berkeley)/Robert Fleming Heizer (September 20, 1965–June 27, 1966)142 objects
- S1988-1989 #14: Indiana University Museum of Archaeology and Anthropology /Nicholas Toth (October 1, 1988–July 11, 1989)141 objects
- S1987-1988 #14: Indiana University (August 24, 1987–September 30, 1988)136 objects
- S2008-2009 #13b: Anthropology (UC Berkeley)/Darren Modzelewski (June 11, 2009–June 23, 2010)128 objects
- S1970-1971 #99: Anthropology (UC Berkeley)/Alan D. Albee (March 17, 1971–October 16, 1974)97 objects
- S1964-1965 #98: Wayne State University/Gordon L. Grosscup (May 20, 1965–August 10, 1984)87 objects
- S1972-1973 #52: Anthropology (UC Berkeley)/Jean M. Pitzer (January 22, 1973–October 14, 1980)85 objects